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Intron Name: Anas_platyrhynchos_platyrhynchos_21_4386754_4387906_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4386754 - 4387906

Intron Length:

1153

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

GATTCTCTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

TTGTCAATAATT

Flanking Amino Acid:

ETPLPALQPAVFPPAFRELP

Intron Amino Acid Position:

340

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.1

76.6

33.9

Major BPS

77.9

0.69

0.8

75.9

Major PPT

0.41

1.1

64.7

41.3

Minor 5ss

-1.4

2.8

52.2

44.4

Minor BPS

61.1

0.43

1.9

82.29

Associated Gene:

Gene:

IFT52

Ensembl Gene ID:

ENSAPLG00000005680

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005906

4384335 - 4396518

12184