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Intron Name: Anas_platyrhynchos_platyrhynchos_21_4387995_4389007_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4387995 - 4389007

Intron Length:

1013

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTCAGCAGC

5'SS Class:

major

3'SS Sequence:

TTCTGTGCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAC

U12 Branch Point Sequence:

TCTCCTGTCACA

Flanking Amino Acid:

LDTTALPAVIKAYEQLNVKH

Intron Amino Acid Position:

310

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.9

0.33

1.3

60.8

44.4

Major BPS

62.6

0.31

1.2

66.7

39.9

Major PPT

78.7

0.65

0.9

72.9

37.4

Minor 5ss

36.9

-1.5

2.8

44.3

37.2

Minor BPS

46.7

-0.2

2.3

63.93

Associated Gene:

Gene:

IFT52

Ensembl Gene ID:

ENSAPLG00000005680

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005906

4384335 - 4396518

12184