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Intron Name: Anas_platyrhynchos_platyrhynchos_21_4389163_4389860_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4389163 - 4389860

Intron Length:

698

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

TGCGTATGTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TAAATCATAACA

Flanking Amino Acid:

LNQMDMEDPEISDYTMLPDA

Intron Amino Acid Position:

259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.1

35.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

0.43

1.1

65.7

44.5

Minor 5ss

29.8

-2.3

3.3

37.5

47.2

Minor BPS

57.2

0.22

1.6

67.38

38.1

Associated Gene:

Gene:

IFT52

Ensembl Gene ID:

ENSAPLG00000005680

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005906

4384335 - 4396518

12184