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Intron Name: Anas_platyrhynchos_platyrhynchos_21_4389930_4390562_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4389930 - 4390562

Intron Length:

633

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TACCCTTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

CTTTCCTGAAAT

Flanking Amino Acid:

LDKEENGKIMDVLFQWLTTS

Intron Amino Acid Position:

236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

26.1

Major BPS

73.8

0.59

0.9

26.8

Major PPT

73.5

0.53

0.8

65.2

35.9

Minor 5ss

39.7

-1.2

2.8

45.9

43.7

Minor BPS

71.8

0.76

1.6

86.48

Associated Gene:

Gene:

IFT52

Ensembl Gene ID:

ENSAPLG00000005680

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005906

4384335 - 4396518

12184