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Intron Name: Anas_platyrhynchos_platyrhynchos_21_4393846_4394806_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4393846 - 4394806

Intron Length:

961

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATGGGA

5'SS Class:

major

3'SS Sequence:

TTTTTAATTCAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TATTTTTTAATT

Flanking Amino Acid:

LEEYGIVFNNDAVVRNVYYK

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

58.6

40.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.3

0.57

1.1

73.6

Minor 5ss

28.8

-2.4

3.5

35.4

43.2

Minor BPS

79.8

1.01

88.33

30.2

Associated Gene:

Gene:

IFT52

Ensembl Gene ID:

ENSAPLG00000005680

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005906

4384335 - 4396518

12184