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Intron Name: Anas_platyrhynchos_platyrhynchos_21_4397719_4397942_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4397719 - 4397942

Intron Length:

224

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

CTCCTTGGCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATGAT

U12 Branch Point Sequence:

GATCACTCAAAA

Flanking Amino Acid:

RITPPFNPNVAGPADLRHFD

Intron Amino Acid Position:

325

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

68.8

42.2

Major BPS

0.45

57.8

Major PPT

0.34

0.9

64.4

36.6

Minor 5ss

32.2

-2

3.1

37.3

42.5

Minor BPS

47.5

-0.1

1.8

58.53

39.6

Associated Gene:

Gene:

SGK2

Ensembl Gene ID:

ENSAPLG00000006291

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006549

4396656 - 4417457

20802