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Intron Name: Anas_platyrhynchos_platyrhynchos_21_4459788_4460473_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4459788 - 4460473

Intron Length:

686

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TTGTTCTGAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

TTTTTCTGAATT

Flanking Amino Acid:

LLLYEVGGNIGERCLDPDTY

Intron Amino Acid Position:

592

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

74.5

41.9

Major BPS

82.1

0.8

71.6

36.4

Major PPT

68.6

0.42

66.4

39.6

Minor 5ss

-1.4

47.2

42.5

Minor BPS

78.4

0.97

1.2

92.49

29.5

Associated Gene:

Gene:

ARHGAP40

Ensembl Gene ID:

ENSAPLG00000007202

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029562

4459419 - 4483158

23740

ENSAPLT00000029124

4459419 - 4494572

35154

ENSAPLT00000046290

4459419 - 4474115

14697