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Intron Name: Anas_platyrhynchos_platyrhynchos_21_4460289_4460473_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4460289 - 4460473

Intron Length:

185

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

CCTCTATCAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAG

U12 Branch Point Sequence:

TTTCCTCTATCA

Flanking Amino Acid:

LLLYEVGGNIGWCHQMEKKS

Intron Amino Acid Position:

619

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

74.5

41.9

Major BPS

49.4

-0

1.7

60.7

45.9

Major PPT

66.9

0.38

0.9

62.5

32.2

Minor 5ss

-1.4

47.2

42.5

Minor BPS

54.5

0.14

1.9

73.61

Associated Gene:

Gene:

ARHGAP40

Ensembl Gene ID:

ENSAPLG00000007202

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007501

4460153 - 4474115

13963