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Intron Name: Anas_platyrhynchos_platyrhynchos_21_4460530_4461544_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4460530 - 4461544

Intron Length:

1015

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTTCTATAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAA

U12 Branch Point Sequence:

GCTTTGTTAACT

Flanking Amino Acid:

NIVNTVNLLKCNNSTECTNL

Intron Amino Acid Position:

600

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.8

81.4

30.6

Major BPS

72.1

0.55

1.2

63.7

43.9

Major PPT

84.1

0.77

0.7

80.1

25.5

Minor 5ss

37.4

-1.4

3.3

49.4

41.4

Minor BPS

62.9

0.48

2.1

79.89

42.3

Associated Gene:

Gene:

ARHGAP40

Ensembl Gene ID:

ENSAPLG00000007202

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029562

4459419 - 4483158

23740

ENSAPLT00000029124

4459419 - 4494572

35154

ENSAPLT00000007501

4460153 - 4474115

13963

ENSAPLT00000046290

4459419 - 4474115

14697