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Intron Name: Anas_platyrhynchos_platyrhynchos_21_4463466_4463737_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4463466 - 4463737

Intron Length:

272

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTTGC

5'SS Class:

major

3'SS Sequence:

CTTCCTTGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TATATTTTAATT

Flanking Amino Acid:

MIHYQDLLWTVSSFLVAQVR

Intron Amino Acid Position:

500

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

67.3

39.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.1

0.57

0.9

68.3

37.4

Minor 5ss

42.7

-0.8

2.8

58.3

40.4

Minor BPS

71.1

0.74

1.2

81.23

34.4

Associated Gene:

Gene:

ARHGAP40

Ensembl Gene ID:

ENSAPLG00000007202

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029124

4459419 - 4494572

35154

ENSAPLT00000007501

4460153 - 4474115

13963

ENSAPLT00000046290

4459419 - 4474115

14697

ENSAPLT00000029562

4459419 - 4483158

23740