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Intron Name: Anas_platyrhynchos_platyrhynchos_21_4464812_4465557_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4464812 - 4465557

Intron Length:

746

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAAGAT

U12 Branch Point Sequence:

GAAGCCTGAACC

Flanking Amino Acid:

EYLPAFAAVQNIPDLKQRLQ

Intron Amino Acid Position:

403

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

74.7

29.4

Major BPS

50.8

0.02

1.1

47.1

36.1

Major PPT

87.3

0.84

0.6

Minor 5ss

37.7

-1.4

2.8

45.3

36.6

Minor BPS

57.7

0.22

1.6

62.72

41.8

Associated Gene:

Gene:

ARHGAP40

Ensembl Gene ID:

ENSAPLG00000007202

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029562

4459419 - 4483158

23740

ENSAPLT00000029124

4459419 - 4494572

35154

ENSAPLT00000007501

4460153 - 4474115

13963

ENSAPLT00000046290

4459419 - 4474115

14697