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Intron Name: Anas_platyrhynchos_platyrhynchos_21_4466278_4466614_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4466278 - 4466614

Intron Length:

337

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTATTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

ACAGACTTAAAA

Flanking Amino Acid:

RNKAAKLKTTEKKLFGVPLN

Intron Amino Acid Position:

293

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

1.1

79.9

Major BPS

81.9

0.79

0.8

81.9

Major PPT

79.5

0.66

0.8

74.6

34.9

Minor 5ss

38.3

-1.3

2.8

50.9

45.4

Minor BPS

49.5

-0

1.7

57.03

41.7

Associated Gene:

Gene:

ARHGAP40

Ensembl Gene ID:

ENSAPLG00000007202

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007501

4460153 - 4474115

13963

ENSAPLT00000046290

4459419 - 4474115

14697

ENSAPLT00000029562

4459419 - 4483158

23740

ENSAPLT00000029124

4459419 - 4494572

35154