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Intron Name: Anas_platyrhynchos_platyrhynchos_21_4467556_4468153_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4467556 - 4468153

Intron Length:

598

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGAAGA

5'SS Class:

major

3'SS Sequence:

TTCTCCTCTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

GCTTTCTGAAAT

Flanking Amino Acid:

HNLRTSNVQKPETQDYSCTV

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.3

71.7

40.1

Major BPS

82.1

0.8

71.6

36.4

Major PPT

81.8

0.72

0.7

77.6

24.4

Minor 5ss

34.2

-1.8

2.9

39.8

39.1

Minor BPS

60.9

0.42

1.6

74.71

41.6

Associated Gene:

Gene:

ARHGAP40

Ensembl Gene ID:

ENSAPLG00000007202

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007501

4460153 - 4474115

13963

ENSAPLT00000046290

4459419 - 4474115

14697

ENSAPLT00000029562

4459419 - 4483158

23740

ENSAPLT00000029124

4459419 - 4494572

35154