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Intron Name: Anas_platyrhynchos_platyrhynchos_21_4473851_4474056_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4473851 - 4474056

Intron Length:

206

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAGGTTTT

5'SS Class:

major

3'SS Sequence:

CTTCCTCTCTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTTAT

U12 Branch Point Sequence:

TCTTCCTTATCT

Flanking Amino Acid:

ADIVSAQVFGHTRHCPCKMN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.1

72.9

39.3

Major BPS

78.8

0.72

67.9

40.1

Major PPT

82.4

0.73

0.7

80.4

24.9

Minor 5ss

46.9

-0.3

3.2

71.8

39.2

Minor BPS

79.3

1.5

91.83

37.8

Associated Gene:

Gene:

ARHGAP40

Ensembl Gene ID:

ENSAPLG00000007202

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007501

4460153 - 4474115

13963

ENSAPLT00000046290

4459419 - 4474115

14697