Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_4503871_4504733_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4503871 - 4504733

Intron Length:

863

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

CTTGCATTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCCCTTGCATT

Flanking Amino Acid:

CTHILPVLEGRLDAKNCKRI

Intron Amino Acid Position:

204

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.6

23.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.9

0.7

0.9

77.3

35.9

Minor 5ss

37.4

-1.4

2.9

50.4

Minor BPS

48.5

-0

1.9

69.73

41.8

Associated Gene:

Gene:

ACTR5

Ensembl Gene ID:

ENSAPLG00000007588

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007884

4502637 - 4512983

10347