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Intron Name: Anas_platyrhynchos_platyrhynchos_21_4505691_4506014_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
4505691 - 4506014

Intron Length:
324

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAACAATG

5'SS Class:
major

3'SS Sequence:
GATCCGTCTGTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AGTTCAT

U12 Branch Point Sequence:
AGTTCATCACAA

Flanking Amino Acid:
ERLDRLLYVQELLEDGQMDQ

Intron Amino Acid Position:
334

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79
0.68
1.1
75.5
40.6

Major BPS
76
0.65
1.1
77.4
37.3

Major PPT
65.9
0.36
0.9
58.6
38

Minor 5ss
42.6
-0.8
3
57.6
46.6

Minor BPS
44.2
-0.4
2.1
57.91
40.7

Associated Gene:

Gene:
ACTR5

Ensembl Gene ID:

Chromosome:
21

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4502637 - 4512983
10347