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Intron Name: Anas_platyrhynchos_platyrhynchos_21_4607015_4607370_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
4607015 - 4607370

Intron Length:
356

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACAGACG

5'SS Class:
major

3'SS Sequence:
GTCATTTTTTCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTAAAAT

U12 Branch Point Sequence:
TTGAGATTAAAA

Flanking Amino Acid:
QQRQKLPVFKLRNHILYLVE

Intron Amino Acid Position:
59

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.2
0.48
1.1
60.5
44

Major BPS
70.6
0.51
1.1
75.9
34.4

Major PPT
83
0.74
0.9
80.3
37.1

Minor 5ss
30.9
-2.2
3.3
40.5
45.4

Minor BPS
47.2
-0.2
2.1
62.76
42.9

Associated Gene:

Gene:
DHX35

Ensembl Gene ID:

Chromosome:
21

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4605780 - 4635805
30026

4605780 - 4635102
29323