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Intron Name: Anas_platyrhynchos_platyrhynchos_21_4613902_4615438_F


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
4613902 - 4615438

Intron Length:
1537

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTATATCTC

5'SS Class:
major

3'SS Sequence:
TATTTTAATGTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TTTATTTTAATG

Flanking Amino Acid:
IVASATLDAEKFRDFFNQND

Intron Amino Acid Position:
215

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.2
0.67
1
71.2
38.9

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
75.6
0.58
0.9
71.7
38

Minor 5ss
44.2
-0.6
2.9
61.5
43.4

Minor BPS
69.2
0.47
1.3
71.2
36.4

Associated Gene:

Gene:
DHX35

Ensembl Gene ID:

Chromosome:
21

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4605780 - 4635805
30026

4605780 - 4635102
29323