Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_4615552_4616424_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4615552 - 4616424

Intron Length:

873

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCCCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

TTTCTACTAATA

Flanking Amino Acid:

TFPVDIFYLQSPVPDYVKST

Intron Amino Acid Position:

252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.8

80.1

28.5

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

82.4

0.73

0.7

76.9

25.2

Minor 5ss

45.4

-0.5

2.7

60.6

44.5

Minor BPS

51.1

0.03

1.9

70.61

35.1

Associated Gene:

Gene:

DHX35

Ensembl Gene ID:

ENSAPLG00000008832

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009195

4605780 - 4635805

30026

ENSAPLT00000009193

4605780 - 4635102

29323