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Intron Name: Anas_platyrhynchos_platyrhynchos_21_4627634_4628748_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4627634 - 4628748

Intron Length:

1115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TCTCATTCTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTCACTGTAATT

Flanking Amino Acid:

MLNVYEAFVKHSKSSQWCQE

Intron Amino Acid Position:

558

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

77.8

33.2

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

82.3

0.73

0.8

76.1

32.2

Minor 5ss

41.3

-1

2.8

49.5

41.2

Minor BPS

55.2

0.24

75.87

41.7

Associated Gene:

Gene:

DHX35

Ensembl Gene ID:

ENSAPLG00000008832

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009195

4605780 - 4635805

30026

ENSAPLT00000009193

4605780 - 4635102

29323