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Intron Name: Anas_platyrhynchos_platyrhynchos_21_4629673_4630200_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4629673 - 4630200

Intron Length:

528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATATA

5'SS Class:

strong_major

3'SS Sequence:

TCTTGCTTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

ATGATCTGAAAT

Flanking Amino Acid:

AAKFHSTGAYRTIRDDHELH

Intron Amino Acid Position:

628

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

89.5

23.2

Major BPS

70.8

0.52

70.6

31.6

Major PPT

73.7

0.53

71.4

38.7

Minor 5ss

38.7

-1.3

2.9

50.9

45.5

Minor BPS

53.1

0.17

1.6

69.32

Associated Gene:

Gene:

DHX35

Ensembl Gene ID:

ENSAPLG00000008832

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009195

4605780 - 4635805

30026

ENSAPLT00000009193

4605780 - 4635102

29323