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Intron Name: Anas_platyrhynchos_platyrhynchos_21_4668511_4678149_F

Intron Information:

Intron Rank:

140984

Intron Class:

major

Intron Phase:

Intron Coordinates:

4668511 - 4678149

Intron Length:

9639

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGCTTC

5'SS Class:

strong_major

3'SS Sequence:

CTTCCCTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAA

U12 Branch Point Sequence:

CTTCCCTTTACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

73.2

39.3

Major BPS

69.8

0.49

37.5

Major PPT

85.6

0.8

0.7

79.5

Minor 5ss

-0.3

3.1

66.9

44.7

Minor BPS

0.59

1.6

77.2

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025921

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024673

4668415 - 4678296

9882