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Intron Name: Anas_platyrhynchos_platyrhynchos_21_4701702_4704573_F

Intron Information:

Intron Rank:

143829

Intron Class:

major

Intron Phase:

Intron Coordinates:

4701702 - 4704573

Intron Length:

2872

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCCAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTTTCTTTCTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

77.9

38.6

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

39.5

-1.2

3.2

55.8

48.4

Minor BPS

-0.2

3.6

83.03

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027510

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024003

4699918 - 4704667

4750