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Intron Name: Anas_platyrhynchos_platyrhynchos_21_4717497_4721650_F

Intron Information:

Intron Rank:

132410

Intron Class:

major

Intron Phase:

Intron Coordinates:

4717497 - 4721650

Intron Length:

4154

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTACGTAGT

5'SS Class:

major

3'SS Sequence:

TCTCTTTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TTTAATATAAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

72.9

44.2

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

86.6

0.82

0.7

80.5

31.5

Minor 5ss

35.9

-1.6

42.6

44.2

Minor BPS

48.3

-0

2.1

74.66

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047362

4717188 - 4728527

11340