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Intron Name: Anas_platyrhynchos_platyrhynchos_21_4731331_4731830_F

Intron Information:

Intron Rank:

134683

Intron Class:

major

Intron Phase:

Intron Coordinates:

4731331 - 4731830

Intron Length:

500

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCAC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAC

U12 Branch Point Sequence:

CCTCTCTTTACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

38.2

Major BPS

0.6

65.6

41.1

Major PPT

88.8

0.87

0.7

81.3

30.7

Minor 5ss

-2.2

3.3

45.6

Minor BPS

56.4

0.2

1.7

64.02

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031852

4731261 - 4751067

19807

ENSAPLT00000026242

4731261 - 4742200

10940