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Intron Name: Anas_platyrhynchos_platyrhynchos_21_4732098_4739123_F

Intron Information:

Intron Rank:

134685

Intron Class:

major

Intron Phase:

Intron Coordinates:

4732098 - 4739123

Intron Length:

7026

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATC|GTAAGGCAC

5'SS Class:

major

3'SS Sequence:

ATTTGCATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTCTGTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.7

0.32

1.3

56.6

42.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

79.1

0.65

0.9

39.1

Minor 5ss

32.6

-2

3.3

42.4

39.1

Minor BPS

49.6

0.05

2.2

76.56

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031852

4731261 - 4751067

19807

ENSAPLT00000026242

4731261 - 4742200

10940