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Intron Name: Anas_platyrhynchos_platyrhynchos_21_5080199_5080861_F

Intron Information:

Intron Rank:

142693

Intron Class:

major

Intron Phase:

Intron Coordinates:

5080199 - 5080861

Intron Length:

663

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTGGGTACC

5'SS Class:

major

3'SS Sequence:

TTGTTTCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

AAGTCCTTAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.9

0.31

1.1

59.9

39.3

Major BPS

84.4

0.85

34.5

Major PPT

85.5

0.8

77.9

36.6

Minor 5ss

32.4

-2

42.8

38.1

Minor BPS

76.5

0.81

1.1

74.09

36.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026919

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019978

5080136 - 5086510

6375

ENSAPLT00000032518

5080136 - 5083926

3791

ENSAPLT00000027734

5080136 - 5081971

1836