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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_5081036_5081763_F

Intron Information:

Intron Rank:
142694
Intron Class:
major
Intron Phase:
Intron Coordinates:
5081036 - 5081763
Intron Length:
728

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
TGG|GTATGTACA
5'SS Class:
major
3'SS Sequence:
TTTCCGCCCTCAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTTTAT
U12 Branch Point Sequence:
ATTTCATTTATT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
79.4
0.69
1
73.3
37.4
Major BPS
96.5
1.15
0.6
86
34.2
Major PPT
76.7
0.6
0.8
73.7
31.3
Minor 5ss
41.7
-0.9
2.4
43.6
43.6
Minor BPS
62.9
0.49
1.9
83.69
36.7

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000026919
Chromosome:
21

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000019978
5080136 - 5086510
6375
ENSAPLT00000032518
5080136 - 5083926
3791
ENSAPLT00000027734
5080136 - 5081971
1836