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Intron Name: Anas_platyrhynchos_platyrhynchos_21_5081834_5086377_F

Intron Information:

Intron Rank:

142695

Intron Class:

major

Intron Phase:

Intron Coordinates:

5081834 - 5086377

Intron Length:

4544

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

AATGGTTTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCAAAT

U12 Branch Point Sequence:

TGTGCCCAAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.8

80.6

31.8

Major BPS

52.4

0.06

1.1

58.8

34.5

Major PPT

73.5

0.53

65.3

44.8

Minor 5ss

35.5

-1.6

3.3

47.5

42.3

Minor BPS

46.5

-0.4

2.1

56.5

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026919

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019978

5080136 - 5086510

6375