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Intron Name: Anas_platyrhynchos_platyrhynchos_21_5112967_5119586_F

Intron Information:

Intron Rank:

146921

Intron Class:

major

Intron Phase:

Intron Coordinates:

5112967 - 5119586

Intron Length:

6620

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCCCCATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTCCCCCCATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.8

81.4

30.6

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

0.56

0.7

69.7

24.3

Minor 5ss

37.4

-1.4

3.3

49.4

41.4

Minor BPS

45.7

-0.3

2.2

66.04

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029130

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022461

5112827 - 5155466

42640

ENSAPLT00000034862

5112827 - 5154839

42013