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Intron Name: Anas_platyrhynchos_platyrhynchos_21_5147540_5154268_F

Intron Information:

Intron Rank:

146923

Intron Class:

major

Intron Phase:

Intron Coordinates:

5147540 - 5154268

Intron Length:

6729

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

AATGATGTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TAAATTTTAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.8

77.8

38.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

62.4

0.28

1.1

53.8

44.8

Minor 5ss

32.4

-2

40.4

45.7

Minor BPS

58.4

0.12

1.3

57.57

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029130

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026896

5116743 - 5154509

37767

ENSAPLT00000022461

5112827 - 5155466

42640

ENSAPLT00000034862

5112827 - 5154839

42013