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Intron Name: Anas_platyrhynchos_platyrhynchos_21_5237241_5237329_R

Intron Information:

Intron Rank:

129956

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5237241 - 5237329

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTGTGTTTA

5'SS Class:

weak_major

3'SS Sequence:

CTCTTGTCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAA

U12 Branch Point Sequence:

ATTTGTTCAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.4

0.39

66.9

34.6

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

72.1

0.5

68.6

37.3

Minor 5ss

46.6

-0.3

2.7

62.7

43.1

Minor BPS

47.8

-0.3

2.1

59.22

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017109

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021581

5233167 - 5237406

4240