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Intron Name: Anas_platyrhynchos_platyrhynchos_21_5304084_5335692_F

Intron Information:

Intron Rank:

125115

Intron Class:

major

Intron Phase:

Intron Coordinates:

5304084 - 5335692

Intron Length:

31609

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTCTGTGCT

5'SS Class:

major

3'SS Sequence:

TTTCATTCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTTTCTTTCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.8

0.33

1.3

62.4

42.4

Major BPS

87.6

0.93

0.9

89.3

Major PPT

87.3

0.84

0.7

85.2

29.2

Minor 5ss

36.4

-1.5

3.1

42.3

44.4

Minor BPS

73.9

0.83

1.6

91.31

32.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017380

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046251

5303935 - 5367694

63760