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Intron Name: Anas_platyrhynchos_platyrhynchos_21_5329225_5335692_F

Intron Information:

Intron Rank:

125109

Intron Class:

major

Intron Phase:

Intron Coordinates:

5329225 - 5335692

Intron Length:

6468

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATCTGA

5'SS Class:

major

3'SS Sequence:

TTTCATTCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTTTCTTTCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

67.8

40.1

Major BPS

87.6

0.93

0.9

89.3

Major PPT

87.3

0.84

0.7

85.2

29.2

Minor 5ss

43.3

-0.7

2.9

56.8

47.3

Minor BPS

73.9

0.83

1.6

91.31

32.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017380

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024212

5329115 - 5367694

38580