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Intron Name: Anas_platyrhynchos_platyrhynchos_21_5377664_5384867_F

Intron Information:

Intron Rank:

134665

Intron Class:

major

Intron Phase:

Intron Coordinates:

5377664 - 5384867

Intron Length:

7204

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATAATCA

5'SS Class:

major

3'SS Sequence:

CCTTCTGTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

CTTTACTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

66.4

33.3

Major BPS

78.2

0.7

77.9

32.1

Major PPT

81.3

0.7

0.8

75.1

33.3

Minor 5ss

43.7

-0.7

2.9

57.2

47.1

Minor BPS

77.1

0.93

1.4

88.84

36.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022407

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037683

5377628 - 5387406

9779