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Intron Name: Anas_platyrhynchos_platyrhynchos_21_5385164_5387346_F

Intron Information:

Intron Rank:

134666

Intron Class:

major

Intron Phase:

Intron Coordinates:

5385164 - 5387346

Intron Length:

2183

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGCATTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TTATTCTGCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.7

1.08

0.7

85.2

32.2

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

79.9

0.67

0.9

73.1

Minor 5ss

34.4

-1.8

3.3

49.7

46.6

Minor BPS

54.3

0.22

1.9

77.16

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022407

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037683

5377628 - 5387406

9779