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Intron Name: Anas_platyrhynchos_platyrhynchos_21_5454431_5457694_F

Intron Information:

Intron Rank:

125111

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5454431 - 5457694

Intron Length:

3264

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGATG

5'SS Class:

strong_major

3'SS Sequence:

ACCAGTATGACAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACAGAT

U12 Branch Point Sequence:

GCTACAGCAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

73.4

43.3

Major BPS

66.3

0.41

37.5

Major PPT

56.6

0.15

1.1

49.9

42.2

Minor 5ss

34.5

-1.8

3.5

47.3

48.3

Minor BPS

41.5

-0.6

2.3

53.56

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017380

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029592

5453666 - 5457986

4321