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Intron Name: Anas_platyrhynchos_platyrhynchos_21_5454431_5461279_F

Intron Information:

Intron Rank:

125108

Intron Class:

major

Intron Phase:

Intron Coordinates:

5454431 - 5461279

Intron Length:

6849

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGATG

5'SS Class:

strong_major

3'SS Sequence:

CTCTTACCCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

TTCCTCTTACCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

73.4

43.3

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

75.3

0.57

0.8

30.4

Minor 5ss

34.5

-1.8

3.5

47.3

48.3

Minor BPS

61.9

0.35

1.6

71.01

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017380

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045718

5335693 - 5462406

126714

ENSAPLT00000023020

5453666 - 5462406

8741