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Intron Name: Anas_platyrhynchos_platyrhynchos_21_5492190_5496235_R

Intron Information:

Intron Rank:

134838

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5492190 - 5496235

Intron Length:

4046

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGCAAG

5'SS Class:

major

3'SS Sequence:

TTCTGCTGAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCTCAG

U12 Branch Point Sequence:

TTCTGCTGAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

66.7

40.4

Major BPS

58.6

0.22

1.5

38.9

Major PPT

57.8

0.18

1.2

60.1

39.6

Minor 5ss

33.4

-1.9

2.8

36.5

41.9

Minor BPS

53.5

0.11

69.51

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019873

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040845

5491716 - 5497035

5320