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Intron Name: Anas_platyrhynchos_platyrhynchos_21_5500253_5501081_F

Intron Information:

Intron Rank:

136554

Intron Class:

major

Intron Phase:

Intron Coordinates:

5500253 - 5501081

Intron Length:

829

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTCCTGTTGAAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAA

U12 Branch Point Sequence:

ATTTCAATAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

81.6

30.3

Major BPS

0.79

0.8

83.7

25.7

Major PPT

63.5

0.3

1.2

38.9

Minor 5ss

37.3

-1.4

3.3

52.6

44.6

Minor BPS

64.3

0.43

1.9

79.62

34.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023573

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046602

5499450 - 5501298

1849