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Intron Name: Anas_platyrhynchos_platyrhynchos_21_5516354_5517987_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5516354 - 5517987

Intron Length:

1634

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTACTT

Flanking Amino Acid:

SDNPSSPEFFMSVKGFTLH*

Intron Amino Acid Position:

311

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

31.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

86.6

0.82

0.7

81.4

23.5

Minor 5ss

32.3

-2

3.3

46.1

42.2

Minor BPS

62.1

0.46

1.8

84.39

36.6

Associated Gene:

Gene:

MAFB

Ensembl Gene ID:

ENSAPLG00000024200

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020967

5516326 - 5519530

3205