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Intron Name: Anas_platyrhynchos_platyrhynchos_21_5597059_5601699_F

Intron Information:

Intron Rank:

123547

Intron Class:

major

Intron Phase:

Intron Coordinates:

5597059 - 5601699

Intron Length:

4641

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGACAA

5'SS Class:

strong_major

3'SS Sequence:

TTGTATCTGTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

GTCCTCTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

67.8

39.3

Major BPS

0.92

0.9

86.2

29.1

Major PPT

74.3

0.55

73.8

41.4

Minor 5ss

29.9

-2.3

3.3

38.1

46.8

Minor BPS

69.9

0.7

1.2

77.64

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016626

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036796

5595253 - 5602049

6797