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Intron Name: Anas_platyrhynchos_platyrhynchos_21_5678395_5679113_F

Intron Information:

Intron Rank:

148777

Intron Class:

major

Intron Phase:

Intron Coordinates:

5678395 - 5679113

Intron Length:

719

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGGTGAT

U12 Branch Point Sequence:

TTTTTTTTCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

71.1

37.5

Major BPS

49.3

-0

1.5

42.8

49.4

Major PPT

94.4

0.5

91.2

20.6

Minor 5ss

33.7

-1.9

2.8

31.8

42.6

Minor BPS

69.5

0.61

1.7

82.25

33.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030090

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028535

5678137 - 5681707

3571