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Intron Name: Anas_platyrhynchos_platyrhynchos_21_5739214_5741510_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5739214 - 5741510

Intron Length:

2297

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTGGT

5'SS Class:

major

3'SS Sequence:

TTTAGTTTTAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

TTAGTTTTAAAG

Flanking Amino Acid:

KPLKRPREDDDTFSWEKRKE

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

69.9

41.1

Major BPS

77.9

0.69

0.8

75.9

Major PPT

74.5

0.55

1.1

74.6

39.1

Minor 5ss

35.7

-1.6

3.3

45.7

43.5

Minor BPS

56.2

0.06

1.6

60.63

41.5

Associated Gene:

Gene:

TOP1

Ensembl Gene ID:

ENSAPLG00000008429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008851

5735554 - 5759185

23632