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Intron Name: Anas_platyrhynchos_platyrhynchos_21_5741682_5745401_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5741682 - 5745401

Intron Length:

3720

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAACTATA

5'SS Class:

major

3'SS Sequence:

GTTTCTCTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

TTTCTCTTGAAG

Flanking Amino Acid:

PKKEEEQKWKWWEEERYPEG

Intron Amino Acid Position:

170

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

79.8

35.3

Major BPS

76.9

0.67

66.3

40.4

Major PPT

75.2

0.57

75.8

33.1

Minor 5ss

-0.5

2.6

56.8

42.7

Minor BPS

62.5

0.25

1.5

68.98

38.2

Associated Gene:

Gene:

TOP1

Ensembl Gene ID:

ENSAPLG00000008429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008851

5735554 - 5759185

23632