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Intron Name: Anas_platyrhynchos_platyrhynchos_21_5745518_5748827_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5745518 - 5748827

Intron Length:

3310

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCTTCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

CGTGCTTTAAAA

Flanking Amino Acid:

LPENVKFYYDGKVMKLSTKA

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.8

78.1

26.4

Major BPS

73.1

0.58

79.6

29.1

Major PPT

79.9

0.67

0.7

75.6

26.5

Minor 5ss

34.2

-1.8

2.8

36.8

41.9

Minor BPS

59.3

0.29

1.6

64.9

41.7

Associated Gene:

Gene:

TOP1

Ensembl Gene ID:

ENSAPLG00000008429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008851

5735554 - 5759185

23632