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Intron Name: Anas_platyrhynchos_platyrhynchos_21_5748950_5749637_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5748950 - 5749637

Intron Length:

688

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGCGGG

5'SS Class:

major

3'SS Sequence:

TTCTTTCTGCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAA

U12 Branch Point Sequence:

TCTTTCTGCAAG

Flanking Amino Acid:

RKNFFKDWRKEMTSEEKSTI

Intron Amino Acid Position:

250

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

59.7

45.2

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

70.1

0.45

1.1

71.5

38.6

Minor 5ss

41.8

-0.9

3.2

55.4

48.8

Minor BPS

46.5

-0.4

2.1

56.8

44.6

Associated Gene:

Gene:

TOP1

Ensembl Gene ID:

ENSAPLG00000008429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008851

5735554 - 5759185

23632