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Intron Name: Anas_platyrhynchos_platyrhynchos_21_5752173_5753246_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5752173 - 5753246

Intron Length:

1074

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGATT

5'SS Class:

major

3'SS Sequence:

ACTTTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TGTATTCCAACT

Flanking Amino Acid:

IMLNPSSRIKGEKDWQKYET

Intron Amino Acid Position:

402

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

1.1

39.4

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

83.4

0.75

0.8

77.6

30.4

Minor 5ss

36.5

-1.5

3.6

47.3

Minor BPS

-0

1.9

70.29

40.4

Associated Gene:

Gene:

TOP1

Ensembl Gene ID:

ENSAPLG00000008429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008851

5735554 - 5759185

23632