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Intron Name: Anas_platyrhynchos_platyrhynchos_21_5754725_5755897_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5754725 - 5755897

Intron Length:

1173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGCAC

5'SS Class:

major

3'SS Sequence:

TGTCTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

AGTGCCTTAACA

Flanking Amino Acid:

YYNKVPVEKRVFKNLQLFME

Intron Amino Acid Position:

512

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

63.9

42.4

Major BPS

0.52

1.1

77.7

35.3

Major PPT

86.2

0.81

0.8

80.9

31.1

Minor 5ss

30.6

-2.2

3.3

33.6

41.9

Minor BPS

76.4

0.83

1.3

78.77

37.4

Associated Gene:

Gene:

TOP1

Ensembl Gene ID:

ENSAPLG00000008429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008851

5735554 - 5759185

23632