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Intron Name: Anas_platyrhynchos_platyrhynchos_21_5755967_5756618_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5755967 - 5756618

Intron Length:

652

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGCATG

5'SS Class:

major

3'SS Sequence:

TCTGCTTCTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TCAATTCTAATG

Flanking Amino Acid:

PEDDLFDRLNTSILNKHLQD

Intron Amino Acid Position:

535

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

1.1

74.7

41.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

79.3

0.66

0.8

77.4

31.3

Minor 5ss

45.4

-0.5

2.9

62.4

42.2

Minor BPS

46.5

-0.4

1.7

48.72

39.4

Associated Gene:

Gene:

TOP1

Ensembl Gene ID:

ENSAPLG00000008429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008851

5735554 - 5759185

23632